Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCGCCCGGGAAGGAGAGAATCCCCCAGATGG
(((((((((((((((((((...&.)))))))))))))........)))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001015880
GeneSymbolPAPSS2
Binding site1869,1900
Score0.846
Seed1
Au0.382
Energy-27.0
Binding len30
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure