Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACCTCCGCCGTCGCC
..((.((.((((.((((((((&))))))))...)))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047431835
GeneSymbolACTN1
Binding site2668,2690
Score0.846
Seed0
Au0.324
Energy-20.8
Binding len22
Me-12.679
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure