Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACAGCATGATGCACAGGA
.((((((((....(((((((..&))))))).....)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001017415
GeneSymbolUSP1
Binding site820,842
Score0.846
Seed1
Au0.632
Energy-18.8
Binding len22
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure