Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTTCAAGACATCAGTGTGCCAGT
..(((((((((.((((......&.))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001017415
GeneSymbolUSP1
Binding site1589,1616
Score0.923
Seed1
Au0.603
Energy-17.5
Binding len17
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure