Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGAACTTGCCCGGGAACACCCAGACACTGACAGAGCTGGAGCTGAAGTGG
(((((((((((((((((((((.&.))))))))))).....................))))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330472
GeneSymbolNUP85
Binding site669,722
Score0.923
Seed1
Au0.412
Energy-25.3
Binding len46
Me-3.938
Phylopstem2.0564985250000003
Phylopflank4.163125437500001
Longest consecutive pairings11
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure