Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTACTCTGTGCTAGGTG
((((((((((....((((((..&))))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001017995
GeneSymbolSH3PXD2B
Binding site5129,5148
Score0.923
Seed1
Au0.515
Energy-20.4
Binding len19
Me-12.255
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure