Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTTAAAGAGCAAGTGCTGAGTGTGCCAGGA
.((((((((((...(((.....&.)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001017995
GeneSymbolSH3PXD2B
Binding site6449,6481
Score0.974
Seed1
Au0.485
Energy-20.3
Binding len18
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure