Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGAGCCCATGCCAGGTT
(((((((((....(.(((....&))).)....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001017995
GeneSymbolSH3PXD2B
Binding site6298,6317
Score0.846
Seed1
Au0.456
Energy-17.3
Binding len19
Me-13.376
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure