Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTAGAGGGCCCGCTGGTC
.((((((..(((((((((((((&)))))))))))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001017995
GeneSymbolSH3PXD2B
Binding site2920,2943
Score0.923
Seed1
Au0.441
Energy-24.5
Binding len23
Me-7.163
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure