Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAAGATTTTAGGACCCAGGAGGTGCTTTTCCTCCAGCTGTTGCCAGTGT
(((((((..((((((((((...&.))))))))))...................))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001018039
GeneSymbolSFMBT2
Binding site5621,5676
Score1.0
Seed1
Au0.426
Energy-25.1
Binding len38
Me-7.308
Phylopstem3.7505515000000003
Phylopflank2.9849316307500002
Longest consecutive pairings10
Position of longest consecutive pairings27
Pairings in 3prime end5
Position3UTR
2D Structure