Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTGGAACTGGAGTATGCCAGC
..(((((((((...........&.))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001018088
GeneSymbolVPS13C
Binding site7452,7477
Score0.923
Seed1
Au0.515
Energy-15.7
Binding len11
Me-11.418
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure