Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTCGAAGGTGCCAGA
..(((((((.....((((....&))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001018111
GeneSymbolPODXL
Binding site5429,5447
Score0.846
Seed1
Au0.603
Energy-16.0
Binding len18
Me-14.517
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure