Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGCTGCAGTGTGCCAGT
..(((((((((..(((((..((&))..)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001024382
GeneSymbolHMBS
Binding site834,853
Score0.923
Seed1
Au0.412
Energy-19.1
Binding len19
Me-9.593
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure