Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGGAACCCAGAGCTGTAAT
((((((((..((((.((((.(&).)))).))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047432042
GeneSymbolLOC124903372
Binding site2157,2180
Score0.923
Seed1
Au0.471
Energy-19.5
Binding len23
Me-6.972
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure