Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACAGAATGCCAGGG
.((((((((....((((.....&))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001030288
GeneSymbolSPN
Binding site2636,2651
Score0.846
Seed1
Au0.485
Energy-17.2
Binding len15
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure