Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTTCAAACTGGTTGCCAGGTT
((((((((..((..........&.))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001031618
GeneSymbolSPDYE2
Binding site272,294
Score1.0
Seed1
Au0.574
Energy-17.6
Binding len14
Me-9.351
Phylopstem0.82483275
Phylopflank0.22237885987499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure