Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCATCAGCCTGGCTGCAGG
(((((((((.(((((..((((&))))......)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047432229
GeneSymbolLCTL
Binding site557,582
Score0.846
Seed1
Au0.382
Energy-21.8
Binding len25
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure