Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGTCTCCCTGGAGCTGCAC
.(((((((.(((..(...(((&)))....)..)).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330472
GeneSymbolNUP85
Binding site1239,1262
Score0.846
Seed1
Au0.382
Energy-18.5
Binding len23
Me-7.229
Phylopstem5.7962228571428565
Phylopflank5.119570268750001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure