Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCCTGATGCCAGGC
.((((((((.((..((((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001031726
GeneSymbolC19orf12
Binding site1564,1580
Score0.923
Seed1
Au0.632
Energy-16.5
Binding len16
Me-7.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure