Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCTGCCAGGTG
((((((((......((((((..&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001031746
GeneSymbolVSTM4
Binding site1846,1861
Score0.846
Seed1
Au0.412
Energy-18.7
Binding len15
Me-14.554
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure