Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTTCCAGTCCATCCCCATTGGTGCCAGCGTG
(((((((((.(((((..(((..&.)))..)))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001033057
GeneSymbolMAGI1
Binding site2219,2254
Score0.923
Seed1
Au0.471
Energy-18.7
Binding len22
Me-5.413
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end4
PositionCDS
2D Structure