Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGACGTGGACATCAGCACACACAGCCCCAGCTTGCCTCTGGCACGGGAGCCAGTGG
(((((((((((.((.((((((.&.))))))..))...))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDXM_047432458
GeneSymbolIL16
Binding site1939,1997
Score0.846
Seed1
Au0.368
Energy-27.9
Binding len26
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure