Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTTCTAACTGAAGCTGAAATCATTTGTGATGTTGTATGCCTGGTA
(((.((((((((((((......&.)))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001033566
GeneSymbolRHOT1
Binding site1628,1676
Score0.846
Seed0
Au0.618
Energy-20.7
Binding len18
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure