Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCAGCCTGCC
..(((((((.((((((..(((&))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047432492
GeneSymbolSHC4
Binding site1144,1162
Score0.923
Seed1
Au0.441
Energy-20.3
Binding len18
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure