Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTACAGAAGGTGAGCCCAGTGC
(((((((((((((((((((...&)))..))))))).))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001033873
GeneSymbolSMAGP
Binding site399,423
Score0.846
Seed1
Au0.456
Energy-24.8
Binding len24
Me-3.938
Phylopstem0.26030300000000006
Phylopflank0.1320773325
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure