Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCTGGAGAAAGCTTTAAACAAGGGGCGCAGA
..((((((((((((((((((..&)))))))).............))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001033886
GeneSymbolCXCL12
Binding site335,368
Score0.923
Seed1
Au0.574
Energy-21.2
Binding len33
Me-4.957
Phylopstem3.7644178750000004
Phylopflank2.52243652375
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end6
PositionCDS
2D Structure