Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGTGCCACAGCCCAGCCTGCC
..(((((((.((((((..(((&.))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047432493
GeneSymbolSHC4
Binding site852,877
Score0.923
Seed1
Au0.441
Energy-20.5
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure