Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGATAAATTGCCAGGTT
((((((((....((.(((....&))).))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001037165
GeneSymbolFOXK1
Binding site5502,5521
Score0.923
Seed1
Au0.574
Energy-16.9
Binding len19
Me-13.143
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure