Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAGCAGCCAACGACATGTTTGAAGATGCAAGGCCAGGTG
(((((((......((((..(((&.)))..))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001037763
GeneSymbolCOL28A1
Binding site2800,2844
Score0.923
Seed1
Au0.544
Energy-15.1
Binding len20
Me-16.011
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure