Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATCTCCTGCCCGGGTAATGCCAGGTA
(((((((((((...((((....&.))))....))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001039111
GeneSymbolTRIM71
Binding site5687,5714
Score0.846
Seed1
Au0.485
Energy-20.6
Binding len22
Me-9.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure