Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTCTTGGCCAGGTG
(((((((...(((.(((((...&)))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001039199
GeneSymbolTTPAL
Binding site5363,5381
Score0.846
Seed1
Au0.603
Energy-18.2
Binding len18
Me-9.407
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure