Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGCAGATGATGCCAGA
..(((((((.(((((((((...&)))))).))).)).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001039366
GeneSymbolATP6V1E1
Binding site730,750
Score0.923
Seed1
Au0.441
Energy-21.4
Binding len20
Me-6.2
Phylopstem2.0680499000000006
Phylopflank3.467226101625
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure