Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTTGTCAGCCAGGTG
(((((((..((((.((......&))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001039591
GeneSymbolUSP9X
Binding site4339,4355
Score0.846
Seed1
Au0.485
Energy-17.0
Binding len16
Me-8.164
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure