Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATTGTAAACGGTGTGCCAGGA
.((((((((((...(((((...&)))))........)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001039656
GeneSymbolTESMIN
Binding site3080,3104
Score0.962
Seed1
Au0.706
Energy-20.3
Binding len24
Me-9.286
Phylopstem0.963935914
Phylopflank0.5257366922500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure