Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGAGGAGATTGCGCCCGCTTTAACTTCGGGGTTAAGCGCCTGGTGA
((((((((((((((((((....&))))))))).)).............................))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001348060
GeneSymbolCXCR4
Binding site275,325
Score0.846
Seed1
Au0.5
Energy-20.0
Binding len50
Me-3.938
Phylopstem-0.1330279142857143
Phylopflank0.06444945499999996
Longest consecutive pairings9
Position of longest consecutive pairings41
Pairings in 3prime end4
Position5UTR
2D Structure