Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGATAGAGGTAAAGTCACAAGGACTATTAGAATTCCAGTGG
((((((..((((((((((.((.&))))))))..)))).........................)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001039937
GeneSymbolINTS6
Binding site5084,5130
Score0.846
Seed0
Au0.632
Energy-20.9
Binding len46
Me-7.795
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure