Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAGCCTCTGGTGCAGGGTGGATAGAGGTCTAGCCAGC
..((((((((((((((((((((&)))))))))...................)))))...)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001039948
GeneSymbolSGSM1
Binding site5513,5556
Score1.0
Seed1
Au0.412
Energy-25.8
Binding len43
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure