Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTCGGATGTCCGACCGCCCAGAGCCTGCATGCGCCGTGGGGCGCCCCAGGACCAGGAGCTGGTGG
((((((((((((((((((....&.)))))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001040097
GeneSymbolMOSPD3
Binding site108,179
Score0.846
Seed1
Au0.176
Energy-29.5
Binding len22
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure