Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTGCCCAGACTGAGCCTGGAATGATGCAGCTCAGTCAAGGAGCAGCAGA
..((((((((((((((((((.(&).))))))))...........................)))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001040103
GeneSymbolOPALIN
Binding site546,596
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len50
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end7
PositionCDS
2D Structure