Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCCGGAGATTTTGCTAGTGG
(((((((...((((((((....&))))))))....))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001040159
GeneSymbolSPOCK3
Binding site1194,1214
Score0.923
Seed1
Au0.588
Energy-20.0
Binding len20
Me-8.55
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
PositionCDS
2D Structure