Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACCTGCTGGTGATGGTGGCTGTGTGCTGGGA
.(((((((((((..........&.))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001040173
GeneSymbolHTR4
Binding site154,187
Score1.0
Seed1
Au0.5
Energy-16.9
Binding len13
Me-6.908
Phylopstem0.9779852545454548
Phylopflank0.14861096750000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure