Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGG
..((((((((((((.(((((..&.)))))..))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001040173
GeneSymbolHTR4
Binding site1349,1386
Score0.923
Seed1
Au0.397
Energy-24.0
Binding len22
Me-5.692
Phylopstem0.3169290307692308
Phylopflank0.48591130000000005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure