Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAGACAGCCGAGGTGCC
..(((.((.(((((((..((.&))...))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047432944
GeneSymbolSH2D7
Binding site1564,1583
Score0.923
Seed0
Au0.382
Energy-19.6
Binding len19
Me-7.914
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure