Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTATTCTCAGGC
.(((((.(((((((((((....&))))))))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001040196
GeneSymbolAGTRAP
Binding site235,254
Score1.0
Seed0
Au0.426
Energy-20.3
Binding len19
Me-5.337
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure