Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACTGGGTATGTTAGGG
.((((((((((...(((.....&)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001040273
GeneSymbolTYSND1
Binding site3101,3118
Score0.808
Seed1
Au0.515
Energy-16.8
Binding len17
Me-9.286
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure