Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATAGTATGCTAGA
..(((((((((.((((......&)))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001040440
GeneSymbolCCDC112
Binding site416,431
Score0.846
Seed1
Au0.676
Energy-17.4
Binding len15
Me-8.304
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure