Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCATTGTCATTGCTAT
...(((((.(((((((((((..&)))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001040712
GeneSymbolPTPRD
Binding site2701,2721
Score1.0
Seed0
Au0.618
Energy-18.2
Binding len20
Me-7.571
Phylopstem1.107227509090909
Phylopflank2.20309947
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure