Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACACCAATAAGAGGAGCCCTTCAGATTGAGCAGAGTGA
(((((((((((((.((((((..&))).)))...)))))))))...............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001040712
GeneSymbolPTPRD
Binding site648,687
Score0.923
Seed1
Au0.559
Energy-21.0
Binding len39
Me-4.794
Phylopstem3.2882209642857143
Phylopflank4.961946425000001
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure