Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTAGGTAGGAGCCT
....(((((((.(((.(((((.&)))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001042403
GeneSymbolUSP44
Binding site3240,3257
Score0.846
Seed0
Au0.588
Energy-21.7
Binding len17
Me-13.126
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure