Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATGCCAGGC
.(((((((.....((((((...&))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001042439
GeneSymbolBPIFA3
Binding site851,865
Score0.846
Seed1
Au0.412
Energy-18.5
Binding len14
Me-13.553
Phylopstem-0.6897402
Phylopflank0.15717514625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure